The detailed information of tRNA gene sequence


Sequence ID>WENV170721303
Genome IDLSQX01185061
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15870
End posion on genome 15797
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgattcgcaa
tRNA gene sequence 
GGGCAGATAGATCAGCTGGAAGATCGCGACATTCGCAATGTCGAGGCCGCGGGTTCAAAT
CCCGCTCTGTCCACtc
Downstream region at tRNA end position 
aaactctggc
Secondary structure (Cloverleaf model)
>WENV170721303	Ala	CGC
                   a      ACtc aaactctggc
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T A G       G C G G G     C
    G       | | | |                 T T
    G       G A T C
      A A          G     AGGCC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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