The detailed information of tRNA gene sequence


Sequence ID>WENV170721315
Genome IDLSQX01185491
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2928
End posion on genome 2852
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctccgcagc
tRNA gene sequence 
GGCGAGGTAGCTAAGTTGGTTAGAGCGCATGATTCATAATCATGAGGTCCCGGGATCATG
CCCCGGTCTCGCTACAA
Downstream region at tRNA end position 
gacaataaat
Secondary structure (Cloverleaf model)
>WENV170721315	Met	CAT
                   c      ACAA gacaataaat
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          C G
                    T     G G C C C     T
      T G A        A      | | | | |     A
    T       A T C G       C C G G G     C
    G         | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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