The detailed information of tRNA gene sequence


Sequence ID>WENV170721343
Genome IDLSQX01186838
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 21128
End posion on genome 21054
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cgggcaccat
tRNA gene sequence 
GCGGTAGTAGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGAGAGTTCGAATC
TCTTCTTCCGCTCCA
Downstream region at tRNA end position 
tagttctttt
Secondary structure (Cloverleaf model)
>WENV170721343	Gly	GCC
                   t      TCCA tagttctttt
                     G - C
                     C - G
                     G - C
                     G - C
                     T   T
                     A - T
                     G - C          T A
                    T     T T C T C     A
        G A        A      + | | | |     G
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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