The detailed information of tRNA gene sequence


Sequence ID>WENV170721346
Genome IDLSQX01186851
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 140
End posion on genome 213
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgatgcatg
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTCACACGGCGAAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCAtga
Downstream region at tRNA end position 
ttttctttcc
Secondary structure (Cloverleaf model)
>WENV170721346	Val	CAC
                   g      Atga ttttctttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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