The detailed information of tRNA gene sequence


Sequence ID>WENV170721349
Genome IDLSQX01186940
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 38060
End posion on genome 38133
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctgttttct
tRNA gene sequence 
GGGGGTATAGTTCAAAGGTAGAGCAACGGTCTCCAAAACCGTTAATGTGGGTTCGAGTCC
TGCTACCCCTGCCA
Downstream region at tRNA end position 
taaagcctga
Secondary structure (Cloverleaf model)
>WENV170721349	Trp	CCA
                   t      GCCA taaagcctga
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C G T C C     A
        A A        A      | + + | |     G
      A     C T T G       G T G G G     C
      G     | | + |                 T T
      G     G A G C
        T A        A     TAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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