The detailed information of tRNA gene sequence


Sequence ID>WENV170721484
Genome IDLSQX01192236
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2484
End posion on genome 2409
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccttaattag
tRNA gene sequence 
GGGCCCATAGTTTCAATTGGTAAAACAGCGGTCTCCAAAACCGTAGTTCTCCGTTCGAGT
CGGAGTGGGCCTGCCA
Downstream region at tRNA end position 
ctatttacta
Secondary structure (Cloverleaf model)
>WENV170721484	Trp	CCA
                   g      GCCA ctatttacta
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A G G C     A
      A A C        A      | | | | |     G
    T       T T T G       C T C C G     C
    T       | | | |                 T T
    G       A A A C
      G T A        A     AGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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