The detailed information of tRNA gene sequence


Sequence ID>WENV170721564
Genome IDLSQX01195120
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1067
End posion on genome 1143
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatcacccga
tRNA gene sequence 
CGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGTAGGTTCGAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
atgtgaacga
Secondary structure (Cloverleaf model)
>WENV170721564	Met	CAT
                   a      ACCA atgtgaacga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | + | | |     G
    T       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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