The detailed information of tRNA gene sequence


Sequence ID>WENV170721569
Genome IDLSQX01195375
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4949
End posion on genome 5025
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtttgaga
tRNA gene sequence 
GGCTCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCCCCGTTCGAA
TCGGGGAAGAGCCACCA
Downstream region at tRNA end position 
aatcacttaa
Secondary structure (Cloverleaf model)
>WENV170721569	Met	CAT
                   a      ACCA aatcacttaa
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     G G G G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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