The detailed information of tRNA gene sequence


Sequence ID>WENV170721616
Genome IDLSQX01197067
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4561
End posion on genome 4488
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gttcaaagac
tRNA gene sequence 
GGCTCCATAGCCAAGTGGTAAGGCAACGGTCTGCAACACCGTGATCACCAGTTCGAATCT
GGTTGGAGCCTCCA
Downstream region at tRNA end position 
ttaaacatga
Secondary structure (Cloverleaf model)
>WENV170721616	Cys	GCA
                   c      TCCA ttaaacatga
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          T A
                    T     T G G T C     A
        G A        A      | | | | |     G
      T     A C C G       A C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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