The detailed information of tRNA gene sequence


Sequence ID>WENV170721694
Genome IDLSQX01200767
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 459
End posion on genome 383
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cagccgtgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCAGGTAGCGCATTTGATTGGGGTTCAAGTGGTCGGACGTTCTAA
TCGTCTCGCCCCGACCA
Downstream region at tRNA end position 
cgaacggctg
Secondary structure (Cloverleaf model)
>WENV170721694	Pro	GGG
                   t      ACCA cgaacggctg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T G C     A
      T G A        A      + | | | |     T
    C       C G C G       G G A C G     C
    A       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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