The detailed information of tRNA gene sequence


Sequence ID>WENV170721708
Genome IDLSQX01201393
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 485
End posion on genome 411
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttccgaattc
tRNA gene sequence 
AGGCACGTAGCTCAGGGGGAGAGCGCTACCCTGACACGGTAGAAGTCCGCGGTTCAAATC
CGCGCGTGCCTACCA
Downstream region at tRNA end position 
tgcaaacaaa
Secondary structure (Cloverleaf model)
>WENV170721708	Val	GAC
                   c      ACCA tgcaaacaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     G C G C C     A
        G A        A      | | | | |     A
      G     C T C G       C G C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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