The detailed information of tRNA gene sequence


Sequence ID>WENV170721800
Genome IDLSQX01203851
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1809
End posion on genome 1882
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcctgccggt
tRNA gene sequence 
GCTGGAGTGGCGCAATCGGTAGCGCAACGGTCTTGTAAACCGTAGGTTGCGAGTTCAAGT
CTCGTCTCCAGCTCtg
Downstream region at tRNA end position 
ctctccacga
Secondary structure (Cloverleaf model)
>WENV170721800	Thr	TGT
                   t      TCtg ctctccacga
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T A A        G      + | | | |     A
    C       C G C G       G C G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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