The detailed information of tRNA gene sequence


Sequence ID>WENV170721821
Genome IDLSQX01204678
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 9747
End posion on genome 9820
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tagaggctgt
tRNA gene sequence 
GCCCCCTTAGCTCAGTCGGCAGAGCGTTTCCATGGTAAGGAAAAGGTCATCAGTTCGATT
CTGATAGGGGGCTCtg
Downstream region at tRNA end position 
tttcttttct
Secondary structure (Cloverleaf model)
>WENV170721821	Thr	GGT
                   t      TCtg tttcttttct
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T A G T C     A
      T G A        A      | | | | |     G
    C       C T C G       A T C A G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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