The detailed information of tRNA gene sequence


Sequence ID>WENV170721831
Genome IDLSQX01205180
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 22438
End posion on genome 22352
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtctttttaT
tRNA gene sequence 
GGAGAGATGTCCGAGCGGTCGAAGGAGGCGGTCTTGAAAACCGTTGAGGCGCAAGTCTCC
GAGGGTTCGAATCCCCCTCTCTCCGGat
Downstream region at tRNA end position 
tggacaacgt
Secondary structure (Cloverleaf model)
>WENV170721831	Ser	TGA
                   T      GGat tggacaacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      |   | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGAGGCGCAAGTCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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