The detailed information of tRNA gene sequence


Sequence ID>WENV170721833
Genome IDLSQX01205180
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 22051
End posion on genome 21964
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataatcaccg
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGAGACGGACTCGAAATCCGTTGTACCGTCTGACGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGata
Downstream region at tRNA end position 
gcttggttat
Secondary structure (Cloverleaf model)
>WENV170721833	Ser	CGA
                   g      Gata gcttggttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGTACCGTCTGACGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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