The detailed information of tRNA gene sequence


Sequence ID>WENV170721834
Genome IDLSQX01205180
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 21919
End posion on genome 21833
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attgtacctT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTCGATGGTGCACGCTTGGAAAGCGTGTGTGCTGAAAGGCACC
GGGGGTTCGAATCCCCCCTTCTCCGTtt
Downstream region at tRNA end position 
tcttcccagt
Secondary structure (Cloverleaf model)
>WENV170721834	Ser	GGA
                   T      GTtt tcttcccagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTGCTGAAAGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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