The detailed information of tRNA gene sequence


Sequence ID>WENV170721856
Genome IDLSQX01206283
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3844
End posion on genome 3920
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gggttgcacc
tRNA gene sequence 
GGGCGTGTAGCTCAGTTGGTTAGAGCGCGTCCCTGATAAGGACGAGGTCCCTGGTTCGAT
TCCAGGCACGCCCACCA
Downstream region at tRNA end position 
ctggctagca
Secondary structure (Cloverleaf model)
>WENV170721856	Ile	GAT
                   c      ACCA ctggctagca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          T T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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