The detailed information of tRNA gene sequence


Sequence ID>WENV170721862
Genome IDLSQX01206574
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 49597
End posion on genome 49521
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agaaacaagt
tRNA gene sequence 
CGGGGCATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGTAGGTTCGAA
TCCTACTGTCCCGACCA
Downstream region at tRNA end position 
tccattccca
Secondary structure (Cloverleaf model)
>WENV170721862	Pro	TGG
                   t      ACCA tccattccca
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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