The detailed information of tRNA gene sequence


Sequence ID>WENV170721882
Genome IDLSQX01207501
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 78
End posion on genome 153
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatttaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAGT
CCTGTCCCCGCAACCA
Downstream region at tRNA end position 
cttttaaact
Secondary structure (Cloverleaf model)
>WENV170721882	Met	CAT
                   t      ACCA cttttaaact
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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