The detailed information of tRNA gene sequence


Sequence ID>WENV170721945
Genome IDLSQX01210303
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 108
End posion on genome 32
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaggttatat
tRNA gene sequence 
CGGGGTTTAGCGCAGTTTGGTAGCGCACTTGGTTTGGGACCAAGGGGCCACAGGTTCAAA
TCCTGTAACCCCGACCA
Downstream region at tRNA end position 
cgtcggagca
Secondary structure (Cloverleaf model)
>WENV170721945	Pro	TGG
                   t      ACCA cgtcggagca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       A C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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