The detailed information of tRNA gene sequence


Sequence ID>WENV170721990
Genome IDLSQX01212006
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 18439
End posion on genome 18364
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tggagcgtat
tRNA gene sequence 
CGGGGTGTAGCGCAGTTGGTAGCGTACCTGCTTTGGGAGCAGGTGGTCGTCCGTTCGAGC
CGGGCCACCCCGACCA
Downstream region at tRNA end position 
tgccaaacag
Secondary structure (Cloverleaf model)
>WENV170721990	Pro	TGG
                   t      ACCA tgccaaacag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C G
                    T     C G G G C     A
      T G A        A      | + | | |     G
    T       C G C G       G T C C G     C
    G       | | | +                 T T
    G       G C G T
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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