The detailed information of tRNA gene sequence


Sequence ID>WENV170722012
Genome IDLSQX01212866
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 121721
End posion on genome 121646
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
nnnnnngcgt
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGTGCCTGACTGGCAGTCAGGAGGTCAGGGGTTCGATC
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
ttttttattg
Secondary structure (Cloverleaf model)
>WENV170722012	Ala	GGC
                   t      ACCA ttttttattg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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