The detailed information of tRNA gene sequence


Sequence ID>WENV170722028
Genome IDLSQX01213205
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1373
End posion on genome 1300
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccggcttttc
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGTCCAAGGCGACGGTTTGCAAAACCGTTATTCGTGAGTTCGAA
TCTCACCGCCGCCTttt
Downstream region at tRNA end position 
ttgtaaatca
Secondary structure (Cloverleaf model)
>WENV170722028	Cys	GCA
                   c      Tttt ttgtaaatca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        A      | | | | |     G
    G       A C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      C C A        G     TATTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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