The detailed information of tRNA gene sequence


Sequence ID>WENV170722068
Genome IDLSQX01215152
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2010
End posion on genome 2099
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaaaaaac
tRNA gene sequence 
GGACAGTTGGGTGAGTGGCTGAAACCACCTCCCTGCTAAGGAGACGTACTGGCAACGGTA
CCGAGGGTTCAAATCCCTCACTGTCCGCCA
Downstream region at tRNA end position 
tttgtgggtc
Secondary structure (Cloverleaf model)
>WENV170722068	Ser	GCT
                   c      GCCA tttgtgggtc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTGGCAACGGTACC
                    C   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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