The detailed information of tRNA gene sequence


Sequence ID>WENV170722084
Genome IDLSQX01215547
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 41535
End posion on genome 41610
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacaccgcac
tRNA gene sequence 
GGGCTCATGGTCTAGCGGTTATGACGTTGCCCTTACACGGCGAAGACCGCCGGTTCGAAT
CCGGCTGAGCCCACCA
Downstream region at tRNA end position 
catccttttt
Secondary structure (Cloverleaf model)
>WENV170722084	Val	TAC
                   c      ACCA catccttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      C G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGACC
                    T - A
                    T + G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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