The detailed information of tRNA gene sequence


Sequence ID>WENV170722085
Genome IDLSQX01215547
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 53869
End posion on genome 53793
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
caggaatcag
tRNA gene sequence 
GCCCGCGTGGGGTAGCTTGGATATCCTAAAAGATTGCGGATCTTTGGACTTGGGTTCGAA
TCCCAGCGCGGGCGCCA
Downstream region at tRNA end position 
ttcttctctc
Secondary structure (Cloverleaf model)
>WENV170722085	Arg	GCG
                   g      GCCA ttcttctctc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     G A C C C     A
    T C G A        G      + | | | |     G
  T         T G G G       T T G G G     C
  G           | | +                 T T
  G         T C C T
    A T A          A     GGAC
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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