The detailed information of tRNA gene sequence


Sequence ID>WENV170722116
Genome IDLSQX01216695
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2765
End posion on genome 2675
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctggactt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCACGTAAGTGG
GCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cggtcaatat
Secondary structure (Cloverleaf model)
>WENV170722116	Ser	TGA
                   t      GCCA cggtcaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCACGTAAGTGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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