The detailed information of tRNA gene sequence


Sequence ID>WENV170722208
Genome IDLSQX01221239
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 658
End posion on genome 583
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gggtaacttt
tRNA gene sequence 
ACGGGTCTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCGACCCGTGCTA
Downstream region at tRNA end position 
gaaatgatct
Secondary structure (Cloverleaf model)
>WENV170722208	Trp	CCA
                   t      GCTA gaaatgatct
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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