The detailed information of tRNA gene sequence


Sequence ID>WENV170722227
Genome IDLSQX01221870
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2984
End posion on genome 2908
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaaaacaa
tRNA gene sequence 
GGGCTTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTAGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ataaatttat
Secondary structure (Cloverleaf model)
>WENV170722227	Met	CAT
                   a      ACCA ataaatttat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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