The detailed information of tRNA gene sequence


Sequence ID>WENV170722231
Genome IDLSQX01222119
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 995
End posion on genome 1068
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccatttttta
tRNA gene sequence 
GGCGACATAGCCAAGCGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCGGTTCGAATCC
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
atttttttnn
Secondary structure (Cloverleaf model)
>WENV170722231	Cys	GCA
                   a      TCCA atttttttnn
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      C     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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