The detailed information of tRNA gene sequence


Sequence ID>WENV170722238
Genome IDLSQX01222309
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1668
End posion on genome 1583
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaagttctat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
AGGGGTTCAAATCCCTCCCTCAGCGCtt
Downstream region at tRNA end position 
tcaccgacaa
Secondary structure (Cloverleaf model)
>WENV170722238	Ser	GCT
                   t      GCtt tcaccgacaa
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A        + | | |     A
    C       A C C G       A G G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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