The detailed information of tRNA gene sequence


Sequence ID>WENV170722415
Genome IDLSQX01228860
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1211
End posion on genome 1287
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgctgtttat
tRNA gene sequence 
CGGGGTTTAGCGCAGTTTGGTAGCGCACTTGGTTTGGGACCAAGGGGCCACAGGTTCAAA
TCCTGTAACCCCGACCA
Downstream region at tRNA end position 
tgccgagtgt
Secondary structure (Cloverleaf model)
>WENV170722415	Pro	TGG
                   t      ACCA tgccgagtgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C G C G       A C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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