The detailed information of tRNA gene sequence


Sequence ID>WENV170722478
Genome IDLSQX01230822
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 6758
End posion on genome 6833
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aaaacggaaa
tRNA gene sequence 
GCGCCATTAGCTCAATTGGTAGAGCAACTGACTCTTAATCAGTGGGTTCGGGGTTCGATT
CCCTGATGGCGCACAA
Downstream region at tRNA end position 
caaggacagg
Secondary structure (Cloverleaf model)
>WENV170722478	Lys	CTT
                   a      ACAA caaggacagg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     G T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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