The detailed information of tRNA gene sequence


Sequence ID>WENV170722545
Genome IDLSQX01233409
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 15980
End posion on genome 16057
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccggtattct
tRNA gene sequence 
CGGGGTGTAGCGCAGCCCGGTTAGCGCGCGTCGTTCGGGACGACGAGGCCGGAGGTTCGA
ATCCTCTCACCCCGACAA
Downstream region at tRNA end position 
aaagccatgg
Secondary structure (Cloverleaf model)
>WENV170722545	Pro	CGG
                   t      ACAA aaagccatgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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