The detailed information of tRNA gene sequence


Sequence ID>WENV170722631
Genome IDLSQX01236243
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 529
End posion on genome 613
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atgcttcatc
tRNA gene sequence 
GCGAGAGTGGCGGAACTGGTAGNNGCGCTGGATTTAGGTTCCAGTGGGGCAACCCGTGAG
AGTTCGAGTCTCTCCTTTCGCACCA
Downstream region at tRNA end position 
ccgtctgttg
Secondary structure (Cloverleaf model)
>WENV170722631	Leu	TAG
                   c      ACCA ccgtctgttg
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T
                     G - C          T G
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G           | |                 T T
    G       N N G C
      T A G        G     TGGGGCAACCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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