The detailed information of tRNA gene sequence


Sequence ID>WENV170722707
Genome IDLSQX01240525
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 41912
End posion on genome 41986
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tctggtgttt
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGTCGGACTTCGAATCCGCAGGTCGGGTGTTCGAG
TCACCCCGGGCGTGCtc
Downstream region at tRNA end position 
ttttgacaat
Secondary structure (Cloverleaf model)
>WENV170722707	Arg	TCG
                   t      GCtc ttttgacaat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C C A C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G T G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    T   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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