The detailed information of tRNA gene sequence


Sequence ID>WENV170722710
Genome IDLSQX01240525
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 60695
End posion on genome 60769
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaaaattta
tRNA gene sequence 
GGGGTGGTAGTTAAGTTGGTTATAACGCCGGCCTGTCACGCCGGAGGCCGCGGGTTCGAG
TCCCGTCCACCCCGCtc
Downstream region at tRNA end position 
atcgaatgca
Secondary structure (Cloverleaf model)
>WENV170722710	Asp	GTC
                   a      GCtc atcgaatgca
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       A T T G       G C G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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