The detailed information of tRNA gene sequence


Sequence ID>WENV170722721
Genome IDLSQX01240695
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 4737
End posion on genome 4812
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttttacat
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCATCGGATTCCAAATCCGAGTGATGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttttgattt
Secondary structure (Cloverleaf model)
>WENV170722721	Trp	CCA
                   t      GCCA cttttgattt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGAT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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