The detailed information of tRNA gene sequence


Sequence ID>WENV170722732
Genome IDLSQX01241163
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2244
End posion on genome 2319
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
caaagttcag
tRNA gene sequence 
GCTGGCGTAGCTCAATTGGCAGAGCACCTGATTTGTAATCAGGGGGTTGCGGGTTCAAGT
CCCATCGCCAGCTCCA
Downstream region at tRNA end position 
gaatgaccgg
Secondary structure (Cloverleaf model)
>WENV170722732	Thr	TGT
                   g      TCCA gaatgaccgg
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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