The detailed information of tRNA gene sequence


Sequence ID>WENV170722765
Genome IDLSQX01242341
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2454
End posion on genome 2380
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacggttcat
tRNA gene sequence 
GTCTCCTTCGTCTAGTGGTTAGGACATCGGGTTTTCATCCCGACAACAGGGGTTCAATTC
CCCTAGGAGATGCGA
Downstream region at tRNA end position 
agtctgaaag
Secondary structure (Cloverleaf model)
>WENV170722765	Glu	TTC
                   t      GCGA agtctgaaag
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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