The detailed information of tRNA gene sequence


Sequence ID>WENV170722777
Genome IDLSQX01242759
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3059
End posion on genome 3133
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgaacaaagc
tRNA gene sequence 
GGGCGATTAACTCAGCGGTAGAGTGTCACCTTCACACGGTGGAAGTCGTTGGTTCGAACC
CAATATCGCCCACCA
Downstream region at tRNA end position 
tcgcaaatca
Secondary structure (Cloverleaf model)
>WENV170722777	Val	CAC
                   c      ACCA tcgcaaatca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T A A C C     A
        G A        A      + | | | |     G
      C     C T C A       G T T G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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