The detailed information of tRNA gene sequence


Sequence ID>WENV170722779
Genome IDLSQX01242782
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 61199
End posion on genome 61288
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttcattaat
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGTTGAAGGAGGCGGTCTTGAAAACCGTTGAACCTTTACGGGTT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ttagtttaat
Secondary structure (Cloverleaf model)
>WENV170722779	Ser	TGA
                   t      GCCA ttagtttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGAACCTTTACGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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