The detailed information of tRNA gene sequence


Sequence ID>WENV170722783
Genome IDLSQX01242798
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 34361
End posion on genome 34274
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
tgcgtgaaat
tRNA gene sequence 
GCGGCTATGGCGGAATTGGTAGACGCGCTACTTTGAGGGGGTAGTATCAGCAATTGATGT
GTGAGTTCAAATCTCACTAGCCGCACCA
Downstream region at tRNA end position 
ttttttttga
Secondary structure (Cloverleaf model)
>WENV170722783	Leu	GAG
                   t      ACCA ttttttttga
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     C A C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G T G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCAGCAATTGATGT
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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