The detailed information of tRNA gene sequence


Sequence ID>WENV170722794
Genome IDLSQX01243117
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 414
End posion on genome 338
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
cctgtgacgt
tRNA gene sequence 
GGGCCATTAGCTCAGCTGGCTAGAGCACCTGACTCTTAATCAGGGTGTCCGGGGTTCGAG
TCCCTGATGGCCCACCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV170722794	Lys	CTT
                   t      ACCA tttttttatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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