The detailed information of tRNA gene sequence


Sequence ID>WENV170722796
Genome IDLSQX01243189
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 879
End posion on genome 803
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgcgcttgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGGGAGTTCGAA
TCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
tttatccgca
Secondary structure (Cloverleaf model)
>WENV170722796	Pro	TGG
                   t      ACCA tttatccgca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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