The detailed information of tRNA gene sequence


Sequence ID>WENV170722842
Genome IDLSQX01245404
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1425
End posion on genome 1500
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aatacctttt
tRNA gene sequence 
GCCGAGATAGCTCAGTCGGTAGAGCAGTGGACTGAAAATCCACGTGTCCCCAGTTCAACT
CTGGGTCTCGGCACCT
Downstream region at tRNA end position 
gatacatttt
Secondary structure (Cloverleaf model)
>WENV170722842	Phe	GAA
                   t      ACCT gatacatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    T     G G G T C     A
      T G A        A      | | | | |     A
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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