The detailed information of tRNA gene sequence


Sequence ID>WENV170722890
Genome IDLSQX01247460
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 1276
End posion on genome 1352
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tccggatctt
tRNA gene sequence 
GTGCCTGTAGCTCAGCTGGATAGAGTGTCAGCCTCCGGAGCTGAAGGTCTCGGGTTCGAA
TCCCGACAGGCACGCCA
Downstream region at tRNA end position 
tttgaataat
Secondary structure (Cloverleaf model)
>WENV170722890	Arg	CCG
                   t      GCCA tttgaataat
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       T C G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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