The detailed information of tRNA gene sequence


Sequence ID>WENV170722931
Genome IDLSQX01249029
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3106
End posion on genome 3021
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggagttctct
tRNA gene sequence 
GTAGACGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
GAGGGTTCAAATCCCTCCGTCTGCGCtt
Downstream region at tRNA end position 
aacatacgca
Secondary structure (Cloverleaf model)
>WENV170722931	Ser	GCT
                   t      GCtt aacatacgca
                     G - C
                     T + G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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