The detailed information of tRNA gene sequence


Sequence ID>WENV170722965
Genome IDLSQX01249798
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 2178
End posion on genome 2261
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atttatactt
tRNA gene sequence 
GCGGACGTGGCGGAATTGGGAGACGCGCTAGACTTAGGATCTAGTGTCTACGACGTGGGG
GTTCAAGTCCCTTCGTCCGCACCA
Downstream region at tRNA end position 
caagggtttg
Secondary structure (Cloverleaf model)
>WENV170722965	Leu	TAG
                   t      ACCA caagggtttg
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T T C C C     A
      T A A        G      + + | | |     A
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      G A G        G     TGTCTACGACGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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