The detailed information of tRNA gene sequence


Sequence ID>WENV170722989
Genome IDLSQX01250497
Search identical group
Phylum/Class[LSQX] anaerobic digester metagenome; 4 biogas reactors fed with cattle manure at either 37C or 55C with and without the addition
Species
Start position on genome 3988
End posion on genome 4063
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agctgtaatg
tRNA gene sequence 
GTGGGCGTAGCTCAGTCGGTAGAGCACAGGATTGTGGCTCCTGGTGTCGTGGGTTCGATC
CCCATCGTCCACCCCA
Downstream region at tRNA end position 
tttcagcaaa
Secondary structure (Cloverleaf model)
>WENV170722989	His	GTG
                   g      CCCA tttcagcaaa
                     G - C
                     T - A
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          C T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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